biocypher

biocypher

A unifying framework for biomedical research knowledge graphs

biochatter-light

The light frontend for BioChatter, in pure Python

biochatter

Backend library for conversational AI in biomedicine

clinical-knowledge-graph

project-template

Template for creating a BioCypher-driven knowledge graph

open-targets

biochatter-next

The advanced implementation for BioChatter, using Next.js

metalinks

pole

Demo data repository (crime statistics)

biochatter-paper

The Manubot repository for writing the BioChatter paper

liana

Knowledge graph for cell-cell interactions using BioCypher

meta-graph

A meta-graph of BioCypher modular adapters, created by a BioCypher pipeline

.github

biochatter-server

Flask server for BioChatter integration into web apps

biomedical-resource-ontology

A repository to store our version of the BRO

biocypher-paper

biocypher.github.io

Organisation webpage

biohackathon2

Template repository for the de.NBI BioHackathon 2, December 2023

chat

Simple landing page for the two BioChatter frontends

clinical-kg-workflow

Contains a Snakemake workflow to create a patient knowledge graph

collectri

decider-genetics

drug-interactions

A BioCypher KG to collect drug interactions

hancestro

igan

BioCypher pipeline for building an IgA Nephropathy knowledge graph using clinicaltrials.org

patient-kg

BioCypher Knowledge Graph for clinical patient data (ICD10, Snomed CT, Loinc, german OPS)

project-template-1

Template for creating a BioCypher-driven knowledge graph

sc2cl

Knowledge graph for mapping and harmonising single cell experiments

tcr-epitope

xinference-docker-builtin