Beast code in Giters

Susie Theroux's repositories

Links for the California Molecular Methods Workgroup SOPs and feedback

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Retrieve phylogeny from algaebase

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Spellcheck taxa names against accepted name file

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Comparing algae DNA taxonomy with morphology-based taxonomy from California stream algae samples

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R package for calculating ASCI scores

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This repository will contain files pertaining to the development of a marine DNA benthic index

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Shiny Rmd dashboard to view and filter GenBank data

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Bioinformatic and computational scripts for developing the mASCI

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QIIME2 pipeline for generating ASVs and assigning taxonomy

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Interactive map for streams

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Co-occurence networks on DNA data

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