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snakemake-workflows
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rad-seq-stacks
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snakemake-workflows/rad-seq-stacks Issues
Samples.tsv format
Closed
6 months ago
Comments count
2
Add benchmark directives
Closed
5 years ago
Add output types of stacks populations script to config.yaml
Closed
5 years ago
Replace output file parameter checks with json schema
Updated
5 years ago
Optimize plot_kmer_mapping
Updated
5 years ago
Make use of replicates
Updated
5 years ago
Remove reads classified (as contamination) by kraken before starting stacks.
Updated
5 years ago
Check and document the amount of filtering that is applied by default by the stacks populations command
Updated
5 years ago
QC: plot of pairwise locus distances
Updated
5 years ago
Replacement of populations step with BWA+Varlociraptor
Updated
5 years ago
Reduce report file size
Updated
5 years ago
rbt_release missing file
Closed
6 years ago
Comments count
2