snafees

ChatGPTranslate

A Chrome Extension to make translating via ChatGPT seamless.

cheatsheets

Quick lookup documents for commonly used tools

ortho_seqs

Converting genomic sequence data to tensor-valued orthogonal polynomials and projecting phenotypes onto sequence space.

Distribution_Mapping_Transfer_Learning

Implementation of distribution mapping based transfer learning

snafees.github.io

My personal website!

cookiecutter

A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.

primate-brain-organoid-paper

Manuscript for k-mer based comparative transcriptomics

TraIN

cerebra

A tool for fast and accurate summarizing of variant calling format (VCF) files

c9-python-getting-started

Sample code for Channel 9 Python for Beginners course

nextflow

A DSL for data-driven computational pipelines

awesome-nextflow

A curated list of nextflow based pipelines

scATAC-benchmarking

Benchmarking computational single cell ATAC-seq methods

Molecular-language-discovery-of-cell-to-cell-communication-molecules-from-RNAseq-data

kmermaid

k-mer similarity analysis pipeline.

simscity

A library to simulate single-cell data

sourmash

Quickly search, compare, and analyze genomic and metagenomic data sets.

TraIN

Kipoi-GWAS

Kipoi-GWAS

kipoi

Kipoi's model zoo API