sirius777coder

GPDL

Generative diverse protein backbones by protein language model

PPI

Hello!This is my first github repository, which is a basic UNIX software to construct a protein-protein network and construct some key problems with some baseline methods. Besides , we also have innovations in these methods.

Bioinformatics-Fileds

To note the basic knowledge of bioinformatics and computational biology.

BBG

bio_embeddings

Get protein embeddings from protein sequences

ganhacks

starter from "How to Train a GAN?" at NIPS2016

LearnGIT

neurips19-graph-protein-design

Generative Models for Graph-Based Protein Design

nlp-beginner

NLP上手教程

papers_for_protein_design_using_DL

List of papers about Proteins Design using Deep Learning

Preparation-for-graduate

这是一个分享国内生物类夏令营面试经验的repository

Protein-Database

ProteinGAN

tmpnn

An explicit graph based deep learning model to design protein sequences.

alphafold

Open source code for AlphaFold.

CodeSet-for-Biology

Utils for AI+Science

micrograd

A tiny scalar-valued autograd engine and a neural net library on top of it with PyTorch-like API

ProteinMPNN

Code for the ProteinMPNN paper

ProtTrans-study

LEARN---ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

sirius777coder.github.io

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