Sinan U. Umu's repositories
scrna-workflow
scRNA workflow of Cellsnake
sncRNA-workflow
A small ncRNA workflow in Snakemake.
MirMachine
MirMachine, a command line tool to detect microRNA homologs in genome sequences.
academic-kickstart
đź“ť Easily create a beautiful website using Academic, Hugo, and Netlify
bioconda-recipes
Conda recipes for the bioconda channel.
Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
markdown-here
Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.
mg2sc
Analyzing metagenomics of single cell RNA-seq
MultiKParallel
MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via a multi-resolution perspective.
sinanugur.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
stop-predatory-journals.github.io
A listing of predatory academic journals and publishers.