simexin's repositories
ancestry_pipeline
Provides helper scripts for inferring local ancestry, performing ancestry-specific PCA, etc
aria2
aria2 is a lightweight multi-protocol & multi-source, cross platform download utility operated in command-line. It supports HTTP/HTTPS, FTP, SFTP, BitTorrent and Metalink.
ASAR
Advanced metagenomic Sequence Analysis in R
bioinformatics-1
Bioinformatics tools developed at Roche NimbleGen
bioinformatics-2
Tools for bioinformatics
CAVA
CAVA (Clinical Annotation of VAriants)
deeplearning-biology
A list of deep learning implementations in biology
eutils
simplified searching, fetching, and parsing records from NCBI using their E-utilities interface
hgvs-1
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
hosts
镜像：https://coding.net/u/scaffrey/p/hosts/git
imputationserver
Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity
Merged_RNASeq-course
Pull of course from Autumn school to be merged to new Cam course
mit-deep-learning
Tutorials, assignments, and competitions for MIT Deep Learning related courses.
OrgChart
It's a simple and direct organization chart plugin. Anytime you want a tree-like chart, you can turn to OrgChart.
precisionFDA
precisionFDA is a cloud based platform that provides an environment where the community can test, pilot, and benchmark new approaches to validating their next-generation sequencing (NGS) analysis pipelines. PrecisionFDA offers community members a secure and independent work area where, at their discretion, their bioinformatics tools or data can be kept private or shared with the precisionFDA participants.
rtg-tools
RTG Tools: Utilities for accurate VCF comparison and manipulation
shadowsocks_install
Auto Install Shadowsocks Server for CentOS/Debian/Ubuntu
ShadowsocksX-NG
Next Generation of ShadowsocksX
somaticseq
An ensemble approach to accurately detect somatic mutations using SomaticSeq
source-han-sans
Source Han Sans | 思源黑体 | 思源黑體 | 思源黑體 香港 | 源ノ角ゴシック | 본고딕
source-han-serif
Source Han Serif | 思源宋体 | 思源宋體 | 源ノ明朝 | 본명조
Source-Han-TrueType
TrueType version of Source Han Sans and Source Han Serif, converted by otRebuilder.
UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets