sierra-moxon

linkml-map-example

predicate_analysis

abstract_summary

automate_mappings

biolink-model-d

Schema and generated objects for biolink data model and upper ontology

cam-pipeline

Data loading pipeline for CAM database

cmdr-transformer

cmdr_transformer

demo_catagory_selection

eecavanna_refscan

Command-line program that scans a LinkML schema-compliant MongoDB database for referential integrity issues

Evidence-Provenance-Confidence-Working-Group

go-cam-schema

go-fastapi-fork

linkml-tutorial-1

my new linkml project!

mixs

Minimum Information about any (X) Sequence” (MIxS) specification

nmdc-patterns

omop_to_rdf

test repo for automating conversion from omop tables to rdf via linkml-schema-automator and linkml-convert

ontogpt

GPT-based ontological extraction tools, including SPIRES

oregon-water-samples

Sample LinkML project setup for 2024 paper figures

predicates

code for querying and reporting on predicate use via smart-api registry meta_knowledge_graph endpoints

prompt_engineering_tests

ReasonerAPI

NCATS Biomedical Translator Reasoners Standard API

schema-automator-monarch

semmeddb_exclude_list

sssom-py

Python toolkit for SSSOM mapping format

testviz

translator-qa-test

translator_helper

tree-viz-linkml

Tree visualizations of a LinkML model

water-sample-schema

Sample LinkML project setup for 2024 paper figures