Shadi's starred repositories
transformers
🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.
Grokking-Deep-Learning
this repository accompanies the book "Grokking Deep Learning"
mxnet-the-straight-dope
An interactive book on deep learning. Much easy, so MXNet. Wow. [Straight Dope is growing up] ---> Much of this content has been incorporated into the new Dive into Deep Learning Book available at https://d2l.ai/.
awesome-embedding-models
A curated list of awesome embedding models tutorials, projects and communities.
deep-learning-notes
Experiments with Deep Learning
latent_ode
Code for "Latent ODEs for Irregularly-Sampled Time Series" paper
trellisnet
[ICLR'19] Trellis Networks for Sequence Modeling
optimaltransport.github.io
Web site of the Computational Optimal Transport book
prob-stats
Probability and Statistics: a simulation-based introduction. An open-access book.
Deep-Kernel-GP
Deep Kernel Learning. Gaussian Process Regression where the input is a neural network mapping of x that maximizes the marginal likelihood
Neural-Kernel-Network
Code for "Differentiable Compositional Kernel Learning for Gaussian Processes" https://arxiv.org/abs/1806.04326
paired_cell_inpainting
Self-supervised learning for microscopy images
CisRegModels
Scripts for building computational models of gene regulation with tensorflow
Variational_Gradient_Matching_for_Dynamical_Systems
Sample code for the NIPS paper "Scalable Variational Inference for Dynamical Systems"
nonstationary-spectral-kernels
Implementation for Non-stationary Spectral Kernels (NIPS 2017)
EVEE-Tools
EVEE-Tools is a suite of scripts for analyzing expression evolution across species.