shujishigenobu

gitc2024feb-rnaseq

hifiasm

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

mapp2g

mapp2g is the tool to map protein sequences to genome references in a splicing-aware way.

pcluster-manager

Manage AWS ParallelCluster through an easy to use web interface

pi-delivery

altair

Declarative statistical visualization library for Python

ez_batch

ezgff_alpha

aws-parallelcluster

AWS ParallelCluster is an AWS supported Open Source cluster management tool to deploy and manage HPC clusters in the AWS cloud.

jbrowse-components

Source code for JBrowse 2, a modern React-based genome browser

dokuwiki

The DokuWiki Open Source Wiki Engine

tools

Codelabs management & hosting tools

seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

EVidenceModeler

source code for EVM

trinityrnaseq

Trinity RNA-Seq de novo transcriptome assembly

bedtools

A powerful toolset for genome arithmetic.

batch-blast-bias

convenient scripts for batch blast search on NIBB bias

getseq

A utility to retrieve biological sequences from public and local databases.

bioruby

bioruby