shujishigenobu

Shuji Shigenobu's repositories

batch-blast-bias

convenient scripts for batch blast search on NIBB bias

Language:RubyMIT100

ez_batch

Language:RubyMIT100

ezgff_alpha

Language:RubyMIT100

genome_annot

genome annotation

Language:RubyMIT100

getseq

A utility to retrieve biological sequences from public and local databases.

Language:Ruby100

mapp2g

mapp2g is the tool to map protein sequences to genome references in a splicing-aware way.

Language:RubyMIT100

OkORF

Predict ORFs in transcriptome sequences, e.g. RNA-seq de novo assembly.

Language:PerlMIT100

academic-kickstart

📝 Easily create a beautiful website using Academic, Hugo, and Netlify

MIT000

academic-kickstart2

Language:TeXMIT000

automated-build-test

Language:Dockerfile000

batch-iprscan-bias

Language:RubyMIT000

codespaces_first_trial

Language:EJSMIT000

du-aws_s3_inventory

MIT000

du_aws_s3_inventory_gem

Language:RubyMIT000

EDGE

EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.

Language:PerlGPL-3.0000

ercc

Language:RubyMIT000

evo2014ngs

Language:RubyMIT000

fast

utility collection to manipulate FASTA data

Language:Ruby000

FlybaseFactory

utilities to manipulate FlyBase data

Language:RubyMIT000

gem_sample_pruby_200502

Language:RubyMIT000

gff_factory

Language:Ruby000

ncbi_datasets_ruby_alpha

Language:RubyMIT000

ngs-pipeline

Tools for NGS analyses

Language:Shell000

omics-collab-cm-nibb

MIT000

openbd_ruby_alpha

Language:RubyMIT000

rails-contigdb_pame3

Language:Ruby000

RsGM8db

Language:RubyMIT000

sample_gem

Language:RubyMIT000

sinatra-tcplot

Language:RubyMIT000

tiny-test-data

Super small biological datasets for unit testing

MIT000