Wei Shen's starred repositories
hanzi-writer
Chinese character stroke order animations and practice quizzes
perfect-bioinformatic-tools
What should perfect bioinformatic tools be like?
bio-data-zoo
Example genomics data for tool developers
minimizer-iter
Iterate over minimizers of a DNA sequence
minimizers
Reference implementations of minimizer schemes to go with the mod-minimizers paper.
streamvbyte-simdgo
A Stream VByte implementation in Go leveraging SIMD techniques
wavefront-aln
A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring
dlb-kmer-sampling
Optimal distance lower bound k-mer sampling.
editdistancek
LMS algorithm for computing edit distance with SIMD optimizations
SubseqHash2
Fast, SIMD-accelerated, multi-set seeding algorithm for error-prone sequences
sketchlib.rust
Rust reimplementation of pp-sketchlib