Sergey Venev (sergpolly)

sergpolly

Geek Repo

Company:University of Massachusetts Medical School

Location:Worcester, MA

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Organizations
dekkerlab
GaleProt
open2c

Sergey Venev's starred repositories

the-book-of-secret-knowledge

A collection of inspiring lists, manuals, cheatsheets, blogs, hacks, one-liners, cli/web tools and more.

License:MITStargazers:137724Issues:2417Issues:0

ollama

Get up and running with Llama 3, Mistral, Gemma 2, and other large language models.

zed

Code at the speed of thought – Zed is a high-performance, multiplayer code editor from the creators of Atom and Tree-sitter.

Language:RustLicense:NOASSERTIONStargazers:41914Issues:188Issues:6684

ruff

An extremely fast Python linter and code formatter, written in Rust.

Language:RustLicense:MITStargazers:29159Issues:76Issues:4743

pulumi

Pulumi - Infrastructure as Code in any programming language 🚀

Language:GoLicense:Apache-2.0Stargazers:20560Issues:195Issues:7233

d2

D2 is a modern diagram scripting language that turns text to diagrams.

Language:GoLicense:MPL-2.0Stargazers:16224Issues:60Issues:1016

taskflow

A General-purpose Task-parallel Programming System using Modern C++

Language:C++License:NOASSERTIONStargazers:9788Issues:248Issues:442

marimo

A reactive notebook for Python — run reproducible experiments, execute as a script, deploy as an app, and version with git.

Language:PythonLicense:Apache-2.0Stargazers:5464Issues:26Issues:436

firefox-csshacks

Collection of userstyles affecting the browser

Language:CSSLicense:MPL-2.0Stargazers:3045Issues:56Issues:328

blis

BLAS-like Library Instantiation Software Framework

Language:CLicense:NOASSERTIONStargazers:2208Issues:77Issues:438

mpire

A Python package for easy multiprocessing, but faster than multiprocessing

Language:PythonLicense:MITStargazers:1962Issues:15Issues:83

tints.dev

10-color Palette Generator and API for Tailwind CSS

fuzzy-search

A fast, accurate and multilingual fuzzy search library for the frontend.

Language:TypeScriptLicense:MITStargazers:676Issues:4Issues:3

hickle

a HDF5-based python pickle replacement

Language:PythonLicense:NOASSERTIONStargazers:485Issues:22Issues:112

higlass

Fast, flexible and extensible genome browser.

Language:JavaScriptLicense:MITStargazers:308Issues:23Issues:577

svg_utils

Python tools to create and manipulate SVG files

Language:PythonLicense:MITStargazers:305Issues:12Issues:38

forkrun

runs multiple inputs through a script/function in parallel using bash coprocs

Language:ShellLicense:MITStargazers:140Issues:3Issues:1

jupyterlab_sublime

A slightly opinionated Sublime notebook cell keybinding for JupyterLab.

Language:TypeScriptLicense:MITStargazers:93Issues:4Issues:19

checksumdir

Simple package to compute a single deterministic hash of the file contents of a directory.

Language:PythonLicense:MITStargazers:91Issues:3Issues:13

bigtools

A high-performance BigWig and BigBed library in Rust

Language:RustLicense:MITStargazers:61Issues:3Issues:14

oxbow

Read specialized NGS formats as data frames in R, Python, and more.

Language:RustLicense:Apache-2.0Stargazers:58Issues:7Issues:16

higlass-python

Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer

Language:PythonLicense:MITStargazers:50Issues:6Issues:58
Language:NextflowLicense:NOASSERTIONStargazers:27Issues:5Issues:62

bedparse

Python module and CLI tool to perform operations on BED files

Language:PythonLicense:MITStargazers:12Issues:4Issues:15
Language:PythonLicense:NOASSERTIONStargazers:9Issues:3Issues:7

coltab

Columnar tables

Language:PythonStargazers:3Issues:2Issues:0
Language:Jupyter NotebookStargazers:2Issues:3Issues:0

pytest-allclose

Gather statistics on allclose comparisons to measure overall test accuracy

Language:PythonLicense:NOASSERTIONStargazers:1Issues:7Issues:8