GALEprot is a GPU-accelerated library for protein threading and lattice protein folding. System requirements Hardware: NVIDIA GPU with compute capability 2.0 or higher OS: Tested on Ubuntu 12.04 LTE; compatible with CentOS and other Linux distributions Software: CUDA 5.0 or above. Download GALEprot: git clone https://github.com/kzeldovich/galeprot.git cd galeprot Compile GALEprot: make make install Compile and run examples: cd examples make ./folding ./protein-design