Sebastian Funk's repositories
rbi.helpers
Helper functions for inference with LibBi. Building on the rbi library.
epinowcast
Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model with support for a range of reporting and generative processes.
statistical-probabilistic-programming-r
Introduction to Probabilistic Programming
allcontributors
all-contributions as an R package
d12frosted.io
Personal site
dotfiles_old
@sbfnk does dotfiles
ebola-cfr
Accompanying code for: Kucharski et al, Lancet, 2014
ecdc-weekly-growth-forecasts
COVID-19 cases forecasts for the ECDC Forecast Hub
Epidemiology
CRAN Task View: Epidemiology
EpiNow2_backup
Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
homebrew-core
🍻 Default formulae for the missing package manager for macOS
homebrew-formulae
Homebrew formulae for libbi
regional-secondary
Prototype function for forecasting a secondary observation from a primary observation across multiple regions. An example application of this function can be found here: https://github.com/epiforecasts/covid-german-forecasts/blob/master/rt-forecast/update-death-from-cases.R. See the documentation of EpiNow2 for more details: https://epiforecasts.io/EpiNow2/dev/
reveal.js
The HTML Presentation Framework
roweb3
rOpenSci website source
touchstone
Smart benchmarking of pull requests with statistical confidence