Saurabh Vikas Talele's starred repositories
gaussian-splatting
Original reference implementation of "3D Gaussian Splatting for Real-Time Radiance Field Rendering"
WaveSimulator2D
A 2D wave simulator running on the GPU. Can be used for 2D light and sound simulations.
LaserEngine
Blueprints for a low-cost laser combiner compatible with wide-field and localization microscopy.
MERFISH_analysis
Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.
PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
RiesPieces
Recipes for open microscopy
Imaging_FCS_1_52
Imaging_FCS 1.52 is a basic ImageJ plugin to calculate and view spatio-temporal correlation functions from 16 bit gray tiff stack files. It was written under FIJI (ImageJ 1.51f; Java 1.8.0_102) and requires Imagescience for statistics (simulator) and Apache Poi for file reading and writing.
DAISYcorrection
Code used in DAISY to correct astigmatism data using the SAF reference
VectorialPSF
Play around with the vectorial description of a dipole emitter, using your own fluorescence microscope properties
psf-simulation-app
App for interactive simulation and visualization of point spread functions.
SIMPLER
run_SIMPLER is a graphical user interface that runs in Matlab (version 2015a or later with Curve Fitting Tool installed). This app allows users of SIMPLER to perform all necessary operations to decode the axial positions of single molecules directly from 2D-SMLM-TIRF data.
direct-Triple-Correlation-Algorithm
Computing Triple-Correlation amongst three binary 2D sparse matrix
MCLMicroDrive
Python wrapper to control a Mad City Labs MicroDrive with 3 axes
MCLMicroDrive
Python wrapper to control a Mad City Labs MicroDrive with 3 axes
pyTrackMateXML
For opening ImageJ TrackMate .xml files with python.
single-molecule-imaging-toolbox
A collection of MATLAB tools for single-molecule image analysis.
ResearchDataSmc56Looping
The Smc5/6 complex is a DNA loop extruding motor
napari-cosmos-ts
napari plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS)