sanger / crawler

Store sample data from Lighthouse labs

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

DPL-016 Stop parsing the unconsolidated plate map data from MK, AP and GLS on date ? [Heron]

rl15 opened this issue · comments

commented

User story
DPL-016 | As POC for HL Labs (Alan K) we would like to stop parsing the plate map data from MK, AP and GLS to reduce the number of duplicate entries of samples in Sanger information systems at source

Who are the primary contacts for this story
Alan K (PAM)
Cristina A (PAM)
Sonia A (PAM)
Ian W (PAM)
Rich L

Acceptance criteria
To be considered successful the solution must allow:

  • Agree date to action change with PAM (WIP with Rich L & Alan)
  • New rule? do not parse unconsolidated plate maps from Milton Keynes, Adderley Park or Glasgow file format examples MK_sanger_report_210520_0800.csv, AP_sanger_report_210520_0130.csv & GLS_sanger_report_210520_0500.csv
  • Log that file was rejected to Imports in http://lighthouse-ui.psd.sanger.ac.uk/imports

Additional context
Expected barcode formats and file names can be found here: https://docs.google.com/spreadsheets/d/1IQRpQiwQgUpYLxAgN-YVXU7TxSArGAczS_P25qDdFiA/edit#gid=0

commented

On 24th discussed on 10am and Sonia G agreed we should do this.

commented

Note briefly discussed on 26th, please leave on for Lemington