samuelgarcia

spike_sorting_motion_benchmark_paper_2023

Spike sorting : how good are we to correct for motion ?

physio

python toolbox to analyse physiological signals : respiration and ECG

school_spike_sorting_WIRED_2024

Material for spike sorting school for WIRED 2024 meeting

school_spike_sorting_marseille_2023

Notebook for the spike sorting school in Marseille October 2023

tridesclous

offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.

formation_python_crnl_2021

physio_benchmark

scripts to the physio python toolbox

python-neo

Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats

school_spike_sorting_Aussois_2024

school_spike_sorting_lyon_2022

Notebook for the spike sorting school in Lyon September 2022

spikeinterface

Meta-package of SpikeInterface's entire family of packages (spikeextractor, spiketoolkit, spikesorters, spikewidgets, spikecomparison).

ephyviewer

probeinterface

Python package to handle probe layout, geometry and wiring to device.

school_spike_sorting_cajal_bordeaux_2024

school_spike_sorting_neuralnet_saclay_2024

spikeinterface-gui

GUI for spikeinterface objects

gdr_neuralnet_school_2021_day1_python

idephyx

Interface for Distributed Ephys eXperiment

MEArec

Fast and customizable of extracellular recordings on MEA

pyacq

Simple Framework for data acquisition (signal, video) in pure python.

pycns

Reader and tools for analysing CNS monitor data

school_spike_sorting_lyon_2021

school_spike_sorting_lyon_2021

simulated_rhythmic_sampling

Simulations of behavioral studies of rhythmic sampling

spikecomparison

Compare, evaluate and benchmark spike sorting results.

spikeextractors

Python-based module for extracting, converting between, and curating recorded and spike sorted extracellular data from any file format.

spikefeatures

Feature extraction library for extracellular waveforms

spikemetrics

Metrics for spike sorting validation/quality control

spikesorters

Collection of spike sorter wrappers

spiketoolkit

Python-based tools for running, curating, evaluating, and comparing popular spike sorting algorithms

spikewidgets

Python plots and widgets relevant to spike sorting and electrophysiology