rkhetani

In-depth-NGS-Data-Analysis-Course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

versioning_data_scripts-1

GitKraken lesson (forked from HBS-RCS)

DGE_workshop_salmon

Intro-to-Shell

Introduction to the Unix shell

test54

AWS-docker

Set of commands to deploy docker containers on an AWS instance

CBCS_normalization

Code and summary results for "Best practices for normalization of Nanostring nCounter gene expression cohorts"

datafest

Materials and code for Harvard DataFest workshop

datafest2018_git

Gitkraken lesson at datafest

DataFest2018_versioning

Sample files from DataFest 2018

DEanalysis

DF2019_versioning

Class materials for datafest

DGE_workshop

gitkraken_workshop

Learning about git and github

hbc-hms.github.io

SinglePaged - Simple Jekyll template

Intro-to-ChIPseq

Intro to ChIPseq using HPC

Intro-to-rnaseq-hpc-salmon

Intro-to-Unix-QMB

Workshop for Intro to Unix

intro_to_vc

leanirng_github

learning_git

class exercise repo

planets

learning github

reproducibility-tools

sleuth

Differential analysis of RNA-Seq

STAR

RNA-seq aligner

test

Hands-on class with GitKraken GUI

test-project

testing mkdocs

test_rproj

training-material

A collection of Galaxy-related training material

versioning_data_scripts

Hands-on workshop for using the Git GUI GitKraken