rkhetani

In-depth-NGS-Data-Analysis-Course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

versioning_data_scripts-1

GitKraken lesson (forked from HBS-RCS)

beginners-python

Session material and solutions for the Beginner's Python course at the AstraZeneca Code Club

DGE_workshop_salmon

test54

AWS-docker

Set of commands to deploy docker containers on an AWS instance

CBCS_normalization

Code and summary results for "Best practices for normalization of Nanostring nCounter gene expression cohorts"

datafest

Materials and code for Harvard DataFest workshop

DEanalysis

DF2019_versioning

Class materials for datafest

DGE_workshop

FlowSorted.Blood.EPIC

This package includes a new cell reference for adult peripheral blood deconvolution arrayed using Illumina HumanMethylationEPIC

git-novice

Software Carpentry introduction to Git for novices.

GitHub_workshop_demo

gitkraken_workshop

Learning about git and github

Intro-to-R-flipped

Intro-to-rnaseq-hpc-salmon

Intro-to-Unix-QMB

Workshop for Intro to Unix

intro_to_vc

items_for_sale_2023

learning_git

class exercise repo

planets

learning github

planets_class

publication_perfect

Six hour hands-on to creating publication-quality plots in R

reproducibility-tools

STAR

RNA-seq aligner

test

Hands-on class with GitKraken GUI

test_rproj

Training-modules

Materials for short, half-day workshops

versioning_data_scripts

Hands-on workshop for using the Git GUI GitKraken