Ricardo A. Vialle's repositories
ABC-Enhancer-Gene-Prediction
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
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ads1-slides
Slides for Algorithms for DNA Sequencing Coursera class
NOASSERTION000
appliedgenomics2020
Description Materials for Spring 2020 Applied Genomics Course
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appliedgenomics2022
Materials for EN.601.449/EN.601.649 Computational Genomics: Applied Comparative Genomics
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bioconda-recipes
Conda recipes for the bioconda channel.
Language:ShellMIT000
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fastqtl
Fork of FastQTL for SVs (to run on Minerva)
Language:C++GPL-3.0000
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singularity-rstudio
RStudio Server in a Singularity container
Language:PythonMIT000
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suez
R package for mapping response-expression QTLs
Language:RApache-2.0000
WGS-QC-Pipeline
A Snakemake pipeline for Quality Control of Whole Genome Sequencing data
Language:Python000
Language:RMIT000
wrangling-genomics
Data Wrangling and Processing for Genomics
Language:ShellNOASSERTION000