replikation / MPOA

Mask Pathogens for Outbreak Analysis

https://maralohde.github.io/MPOA-documentation/

replikation/MPOA Issues

test and update newest minimap2 version
Updated a month ago
add bowtie and bwa as mapping options
Closed 5 months ago
add test profile
Updated 5 months ago
Problematic sites are only reported based on the masked FASTA
Closed 5 months ago3
Integrate raw signal plots for ambigous positions
Closed 5 months ago
speed up frequency plotting
Updated 5 months ago1
set degen to default and make frequency optional
Closed 8 months ago
count all IUPAC codes
Closed a year ago1