Reactome (reactome)

Reactome

reactome

Geek Repo

A curated pathway database

Location:Canada, US, UK

Home Page:https://reactome.org

Github PK Tool:Github PK Tool

Reactome's repositories

graph-core

Models the Reactome knowledgebase into a interconnected graph

content-service

The new Reactome REST API to access the data

graph-importer

Converts the Reactome knowledgebase into a interconnected graph

Language:JavaStargazers:7Issues:0Issues:0

Website

Contains the code and configuration for the website

Language:PHPLicense:GPL-2.0Stargazers:5Issues:0Issues:0

analysis-service

A RESTful API to access pathway analysis tools

Language:JavaStargazers:4Issues:0Issues:0

gsa-backend

Backend code of the Kubernetes based ReactomeGSA Analysis System

Language:PythonStargazers:4Issues:0Issues:0

analysis-core

Pathway enrichment and expression analysis as well as species comparison tool

Language:JavaStargazers:3Issues:0Issues:0

release-qa

A collection of tools to perform QA checks during the Release process.

Language:JavaStargazers:2Issues:0Issues:0
Language:JavaLicense:AGPL-3.0Stargazers:1Issues:0Issues:0
Language:JavaStargazers:1Issues:0Issues:0

event-pdf

Generates the Reactome book

Language:JavaStargazers:1Issues:0Issues:0

graph-qa

Used to report possible data inconsistencies

Language:JavaStargazers:1Issues:0Issues:0
Language:TypeScriptLicense:Apache-2.0Stargazers:1Issues:0Issues:0
Language:PythonLicense:Apache-2.0Stargazers:1Issues:0Issues:0

ReactomeGSA.report

Report generating features for the ReactomeGSA Pathway Analysis tool

Language:RLicense:NOASSERTIONStargazers:1Issues:0Issues:0

release-go-update

Data-release-pipeline: Synchronization of gk_central GO instances with Gene Ontology (http://geneontology.org/)

doi-suggester

Suggests which entities might need a DOI

Language:JavaLicense:Apache-2.0Stargazers:0Issues:0Issues:0
Language:JavaStargazers:0Issues:0Issues:0
License:CC0-1.0Stargazers:0Issues:0Issues:0

Pathway-Exchange

Pathway Exchange Code Repository

Language:JavaStargazers:0Issues:0Issues:0
Language:JavaStargazers:0Issues:0Issues:0
Stargazers:0Issues:0Issues:0

reactome_chatbot

This is Reactomes chatbot to its database and search index

Language:PythonLicense:Apache-2.0Stargazers:0Issues:0Issues:0

release-chebi-update

Data-release-pipeline: Synchronization of gk_central Reference Molecule instances with ChEBI (https://www.ebi.ac.uk/chebi/)

Language:JavaStargazers:0Issues:0Issues:0

release-common-lib

Data-release-pipeline: Common code for Reactome data-release-pipeline steps

Language:JavaStargazers:0Issues:0Issues:0

release-cosmic-update

Code for updating COSMIC identifiers.

Language:JavaLicense:Apache-2.0Stargazers:0Issues:0Issues:0

release-download-directory

Data-release-pipeline: Generation of files for the Reactome website download directory

Language:JavaStargazers:0Issues:0Issues:0

release-jenkins-utils

Data-release-pipeline: Utilities repository that contains files for initializing Release via Jenkins and general-use scripts used in Release

Language:GroovyStargazers:0Issues:0Issues:0

release-orthoinference

Data-release-pipeline: Orthology projection of human reactions and pathways to non-human species

Language:JavaStargazers:0Issues:0Issues:0
Language:JavaStargazers:0Issues:0Issues:0