rdinnager / SDM_datasets

A list of datasets suitable for large-scale Species Distribution Model benchmarking

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SDM datasets

A list of datasets suitable for large-scale Species Distribution Model (SDM) benchmarking

Big Data

The GeoLifeCLEF 2020 Dataset

Data with species occurrences of plants for France and U.S. along with covariates and satellite imagery.

Paper: https://arxiv.org/abs/2004.04192

Data: https://lila.science/datasets/geolifeclef-2020/

Eco-ISEA3H: A Spatial Database of Earth's Climate and Biogeography

Data on hexagonal grids for 3,030 variables (climate, human related, soil, etc.) and occurrences for 900 extant and extinct large mammals.

Paper: https://www.nature.com/articles/s41597-023-01966-x

Data: https://etsin.fairdata.fi/dataset/552c6ac2-4677-4a7b-952f-1632b2b9c335

Small Data

Data from: A comprehensive evaluation of predictive performance of 33 species distribution models at species and community levels

Contains 5 datasets of species occurrences and environmental variables for different organismal groups and different areas. Dataset size ranges from 50 to 242 species. Was used to test joint species distribution model frameworks (JSDMs).

Paper: https://esajournals.onlinelibrary.wiley.com/doi/full/10.1002/ecm.1370

Data: https://zenodo.org/record/2637812#.ZGexrs7MKM9

Elith et al. Dataset

Paper:

Data:

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A list of datasets suitable for large-scale Species Distribution Model benchmarking