Qingpeng "Q.P." Zhang's repositories
qingpeng.github.com_backup
Website
2013-khmer-counting
Paper code: "These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure"
cpython
The Python programming language
nextflow
A DSL for data-driven computational pipelines
dib-lab
Issue tracker and Web site for the Lab for Data Intensive Biology at UC Davis.
coding-challenge
Challenge for Insight Data Engineering
spark
Mirror of Apache Spark
git-novice
Software Carpentry introduction to Git for novices.
igs-diversity
microbial diversity analysis package based on IGS for whole-genome shotgun metagenomic data
2013-diversity
Using the concept of informative genomic segment to investigate microbial diversity of metagenomics sample
bookrecommendations
This is a repo for book recommendations for 2015-05-28-monsanto SWC workshop
khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more