qingpeng

jgi-ViCA

Classifying virus DNA sequences using large scale machine learning with Apache Spark

VenmoPlus

An Insight Data Engineering Project using Spark, Kafka, ElasticSearch, Redis, Flask, AngularJS

igs-diversity

microbial diversity analysis package based on IGS for whole-genome shotgun metagenomic data

2014-virus-meta

qingpeng-thesis

vica

Vica: Software to identify highly divergent DNA and RNA viruses and phages in microbiomes

2013-diversity

Using the concept of informative genomic segment to investigate microbial diversity of metagenomics sample

2013-khmer-counting

Paper code: "These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure"

2014-streaming

2015-05-28-monsanto

2016-02-22-isu

2016-03-01-Jupyter

awesome-mle-resource

bookrecommendations

This is a repo for book recommendations for 2015-05-28-monsanto SWC workshop

coding-challenge

Challenge for Insight Data Engineering

cpython

The Python programming language

dib-lab

Issue tracker and Web site for the Lab for Data Intensive Biology at UC Davis.

git-novice

Software Carpentry introduction to Git for novices.

githubpages

InsightDataEngineeringVenmoPlus

khmer

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

nextflow

A DSL for data-driven computational pipelines

nullgraph

Poster

qingpeng.github.com_backup

Website

qingpeng.github.io.old

SoftwareCarpentryWuhan

spark

Mirror of Apache Spark

Sssssseddddd

temp