qiime2 / q2-cutadapt

qiime2/q2-cutadapt Issues

Output multiple artifacts per primer, similar to Cutadapt's demultiplexing method
Updated 15 days ago4
Convert --verbose stats to visualization
Updated 5 months ago3
Update for cutadapt 3.0
Closed a year ago
Include quality trimming in the q2-cutadapt plugin?
Closed a year ago3
Demux dual-index PE seqs
Closed a year ago1
add support for multicore?
Closed 2 years ago7
reorient/demux mixed-orientation reads
Closed 4 years ago8
`trim-single`: accept `SampleData[JoinedSequencesWithQuality]`
Updated 4 years ago4
Plugin error from cutadapt:
Closed 5 years ago1
When called from a shell script, qiime2 is calling the system version of cutadapt, not the qiime version.
Closed 5 years ago5
Expose --m (min output read length) parameter
Closed 5 years ago4
Too many open files
Closed 5 years ago13
trim-*: discard unmatched
Closed 5 years ago10
Cutadapt behaving differently inside and outside of qiime2
Closed 6 years ago1
Add citations
Closed 6 years ago
Linked primer description text
Closed 7 years ago
Add Log Ouput
Closed 7 years ago1