qianwg

Coxsubgroup

Generate subgroup tables for survival analysis

ACStudy

ALD-study

ALD study data analysis

AutoScore-Survival

BianqueNet

Diabetes_Dementia_MR

This is the code resource for the paper "Type 2 diabetes and dementia in the Health and Retirement Study: A Mendelian randomization approach"

ecg_ai

Data processing scripts for ECG-AI

empirical_proxy_measures

Beyond brain age: Empirically-derived proxy measures of mental health.

GeneticallyProxiedGIP

Scripts for manuscript

GEOquery

The bridge between the NCBI Gene Expression Omnibus and Bioconductor

ggplot-courses

👨‍🏫 ggplot2 Teaching Material

heart-disease-glm

Ordinal logistic regression of Cleveland Clinic Foundation heart disease dataset.

ibm_rct_prediction

A repo to explore randomised control data and test the capacity of transmission to capture dynamics observed

leukemia-paper

Analysis code and data for leukemia paper (preliminary title: Single cell mRNA signals reveal a distinct developmental state of KMT2A-rearranged infant B-lymphoblastic leukaemia)

maldi_amr

Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"

MESA

Multi-Ethnic Study of Atherosclerosis - Heart and Vascular Institute

ML-dementia-progression

MTB-CNN

CNN models for antibiotic resistance prediction in M. tuberculosis genomes. From Green & Yoon et al (forthcoming)

Neuropred

Comparison of deep learning techniques and regularised Cox regression models in the prediction of neurodegenerative diseases in the general older population

nricens

:exclamation: This is a read-only mirror of the CRAN R package repository. nricens — NRI for Risk Prediction Models with Time to Event and Binary Response Data

PC_CNA_signature

Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/

pytorchTutorial

PyTorch Tutorials from my YouTube channel

Rcode

scell_lung_adenocarcinoma

This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset

scRNA-seq-for-diverse-human-rashes

scRNA-seq-motor-neuron

Codes for computational analysis of scRNA-seq data of mouse motor neurons

scRNA_smart_seq2

Seq2Vec

a novel encoding method for viral identification in metagenomics

SmileGAN

traj

Revised functions of the R packages crimCV and traj