pyc1216's starred repositories

pysamstats

A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM or BAM file.

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simple-video-cutter

Windows-based tool for efficient browsing and cutting video footage

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WoW-3.3.5a-Addons

Most Useful WoW Addons for Patch 3.3.5a WotLK

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NGS-analysis

二代测序数据分析

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pyppeteer

Headless chrome/chromium automation library (unofficial port of puppeteer)

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awesome-free-chatgpt

🆓免费的 ChatGPT 镜像网站列表,持续更新。List of free ChatGPT mirror sites, continuously updated.

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HLAminer

HLAminer environment containerized for singularity

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PiPiName

根据三才五格和古诗文给宝宝起名

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xorbits

Scalable Python DS & ML, in an API compatible & lightning fast way.

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TRUST4

TCR and BCR assembly from RNA-seq data

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neoantigen-vaccine-pipeline

Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines

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fastq_generator

A suite of tools to generate random or mapped fastq files

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mixcr

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

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snakemake-wrappers

This is the development home of the Snakemake wrapper repository, see

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rtg-tools

RTG Tools: Utilities for accurate VCF comparison and manipulation

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Tkinter-Designer

An easy and fast way to create a Python GUI 🐍

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Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

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pcgr

Personal Cancer Genome Reporter (PCGR)

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awesome-cancer-variant-databases

A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

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jvarkit

Java utilities for Bioinformatics

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DRAGMAP

DRAGEN open-source mapper

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hlaloh-pipeline

hla-typing by optitype & polysolver , detect loh by lohhla.

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CPlusPlusThings

C++那些事

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lancet

Microassembly based somatic variant caller for NGS data

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awesome-cs-books

🔥 经典编程书籍大全,涵盖:计算机系统与网络、系统架构、算法与数据结构、前端开发、后端开发、移动开发、数据库、测试、项目与团队、程序员职业修炼、求职面试等

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snakemake_RNAseq_PDX

pipeline to analyze RNAseq data from PDX samples

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python-docx-template

Use a docx as a jinja2 template

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fastv

An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.

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Platypus

Platypus Variant Caller

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