pwwang / ceQTL

The co-expression Quantitative Trait Loci pipeline

ceQTL

The co-expression Quantitative Trait Loci pipeline

Installation

Requirements

• Python & R
• Python packages: PyPPL, bioprocs

Installation

• pip install git+https://github.com/pwwang/bioprocs
• git clone https://github.com/pwwang/ceQTL
• Create a link in your $PATH:

  cd /usr/bin
  ln -s <path/to/ceQTL>/ceQTL.py 
  ln -s <path/to/ceQTL>/ceQTL-tool.py 

• Or add <path/to/ceQTL> to your $PATH