pwwang's repositories
python-varname
Dark magics about variable names in python
immunopipe
Integrative analysis for scTCR- and scRNA-seq data
datar-numpy
The numpy backend for datar.
datar-pandas
The pandas backend for datar
pipen-args
Command line argument parser for pipen
pipen-diagram
Draw pipeline diagrams for pipen.
pipen-report
Report generation system for pipen
pipen-verbose
Add verbosal information in logs for pipen.
immunopipe-example
An example of immunopipe
pipen-annotate
Use docstring to annotate pipen processes
pipen-cli-init
A pipen CLI plugin to create a pipen project (pipeline)
pipen-cli-require
Checking the requirements for processes of a pipeline
pipen-filters
Add a set of useful filters for pipen templates.
pipen-board
Visualizing configuration and running of pipen pipelines on the web
pipen-cli-run
A pipen cli plugin to run a process or a pipeline
pipen-lock
Process lock for pipen to prevent multiple runs at the same time
pipen-log2file
Save running logs to file for pipen
pipen-runinfo
Generate running information for jobs in pipen pipelines.
immunopipe-ThomasW-2020
Reanalysis of the data from Wu, Thomas D., et al. 2020 using immunopipe.
immunopipe-ZhengY-2020
Reanalysis of the scRNA-seq and scTCR-seq data from Zheng, Y., et al. 2020 using immunopipe.
pipen-cli-ref
Make reference documentation for processes
pipen-poplog
Populate logs from jobs to running log of the pipeline