prakashraaz

PythonDataScienceHandbook

Python Data Science Handbook: full text in Jupyter Notebooks

ml-coursera-python-assignments

Python assignments for the machine learning class by andrew ng on coursera with complete submission for grading capability and re-written instructions.

stanford-tensorflow-tutorials

This repository contains code examples for the Stanford's course: TensorFlow for Deep Learning Research.

machine-learning-mindmap

A mindmap summarising Machine Learning concepts, from Data Analysis to Deep Learning.

handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

DeepTE

Neural network classification of TE

ISLR-python

An Introduction to Statistical Learning (James, Witten, Hastie, Tibshirani, 2013): Python code

Data-science-best-resources

Carefully curated resource links for data science in one place

Mycoheterotrophy_paper_scripts

perl_and_r_scripts

Data-Science-Resources

Data Science related resources and cheatsheets

Machine-Learning-with-Python

Practice and tutorial-style notebooks covering wide variety of machine learning techniques

excelerate-scRNAseq

Single RNA-seq data analysis with R (Finland, May, 2019)

ggpy

ggplot port for python

ml_lab

scikit-learn-videos

Jupyter notebooks from the scikit-learn video series

my_scripts

scripts_prt

ds-cheatsheets

List of Data Science Cheatsheets to rule the world

DBDA-python

Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code

LTR_retriever

LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.

DataSciencePython

common data analysis and machine learning tasks using python

Seq-Gen

Sequence simulator

jcvi

Python utility libraries on genome assembly, annotation and comparative genomics

vsearch

Versatile open-source tool for metagenomics

trinityrnaseq

Trinity RNA-Seq de novo transcriptome assembly

wgd

Python package and CLI for whole genome duplication analyses

Module1

Teaching material for Summer Institute in Statistics for Big Data Module 1.

NSF-Summer-REU-Bioinformatics-Training

NSF Summer REU Training

RNA-Sequence-Analysis-Non-Model-Species-Eastern-larch

ComputationalGenomicsManual

Robs manual for the computational genomics and bioinformatics class.

toast2018

Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 20th of March 2018.