Prakash R Timilsena's repositories
awesome_spatial_omics
tools and notes for spatial omics
Programming_notes
Programming-related notes
workshop-scRNAseq
Single cell RNA sequencing analysis course
Udemy---Machine-Learning
Notebooks for Course
cornell-cs5785-applied-ml
Teaching materials for the applied machine learning course at Cornell Tech
prakashraaz
Config files for my GitHub profile.
SingeCellMultiOmicsNetwork
Repository for book chapter titled "Gene regulatory network modelling using single-cell multi-omics in plants"
spatial_scog_workshop_2022
Tutorials for the SCOG Virtual Workshop ‘Spatial transcriptomics data analysis in Python’ - May 23-24, 2022
awesome-deepbio
A curated list of awesome deep learning applications in the field of computational biology
workshop_omics_integration
Workshop in omics integration and systems biology
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
ngmlr
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
cheatsheets
RStudio Cheat Sheets
ksrates
ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.
Training-modules
Materials for short, half-day workshops
utilities
Some functions in R
data-science-1
:bar_chart: Path to a free self-taught education in Data Science!
zero-to-mastery-ml
All course materials for ZTM ML on Udemy
course-v3
The 3rd edition of course.fast.ai
python-cheatsheet
Comprehensive Python Cheatsheet
tidytuesday
Official repo for the #tidytuesday project
jupyter
Jupyter metapackage for installation, docs and chat
cracking-the-data-science-interview
A Collection of Cheatsheets, Books, Questions, and Portfolio For DS/ML Interview Prep