pleiadian53 / tpheno

Prototypes for EHR-sequencing and temporal phenotyping. Key methods: sequence models, LSTM, attention mechanism, cluster analysis, word & document embeddings, and other NLP methods.

Temporal Phenotyping (TPheno)

Introduction

Prototype modules for temporal phenotying based on the EHR-sequencing pipeline.

Please refer to this short summary paper EHR Sequencing for Disease Subtyping for more details

Modules

seqmaker: primary module

to be continued ...