Barnett Chiu's repositories
clinical-analytics-demo
A demo for predicting patient health status via diagnosis and prescription drugs. Key methods: (simple) EHR-sequencing, NLP, classification algorithms (e.g. logistic regression, decision tree)
loinc_predictor2
Prototypes for LOINC code predictions and imputations. Key ideas: string/text similarity metric learning, document embeddings, contrastive loss and Siamese network, classification algorithms (e.g. logistic regression, random forest), EDA via dimensionality reduction (e.g. t-SNE, PCA).
zero_shot_classification
Implementation of the paper "Train Once, Test Anywhere: Zero-Shot Learning for Text Classification"
cf_ensemble
sandbox for exotic ensemble learning algorithms
tensorflow-developer
This module organizes the source codes from DeepLearning.AI TensorFlow Developer Specialization for future reuse
biomedical-app
A collection of prototypes for biomedical applications. E.g. optimal protein-drug binding via hungarian algorithm.
qrecommender
A collection of implementations useful for building recommender systems. Key methods: matrix factorization, regression, collaborative filtering, evolutionary algorithm
CD8_aging_figure_scripts
Figure Scripts for the healthy CD8 Aging Manuscript
coursera-Deep-Learning-Specialization
This course is created by deeplearning.ai. Master Deep Learning, and Break into AI
DeepClustering
Methods and Implements of Deep Clustering
FRASER-analysis
Accompanying analysis code for the FRASER manuscript
gcn
Implementation of Graph Convolutional Networks in TensorFlow
GRL
A generalized reinforcement learning framework that adapts to time-varying and evolving systems.
hyena-dna
Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena
math-science-video-lectures
List of Science courses with video lectures
scikit-learn
scikit-learn: machine learning in Python
tensorflow
Computation using data flow graphs for scalable machine learning
tf-vs-pytorch
A companion code for my Medium post