Philipp Bayer's repositories
Things-a-scientist-is-suppposed-to-know
A comprehensive and long list of things a modern scientist is supposed to know
submission_checklist
A checklist to help you avoid all those minor errors when submitting a scientific manuscript
Goodreads_visualization
A Jupyter notebook where I play with my Goodreads data
R_gene_analysis
Linking disease resistance gene numbers with yield in soybean
dirty_data
Dirty data to teach data cleaning in R
r-novice-gapminder
Introduction to R for non-programmers using gapminder data.
ARC_Friend
Takes a ORCID exported bibliography and puts it into a nice format for the ROPE section of an ARC application
biobeaker_testing
Testing biobeaker models!
Brassica_oleracea_rapa_napus_code
Code for the Brassica oleracea/rapa/napus genomic comparison
github-issue-templates
:symbols: A collection of GitHub issue and pull request templates
learning_docker
Getting started with Docker
OceanOmics-amplicon
A pipeline to analyse marine fish amplicon data
OceanOmics-classifier-comparison
Comparing eDNA taxonomic classifiers
OceanOmics-ENAUploads
This keeps track of OceanOmics' ENA uploads; notably, the settings used and the returned statuses and IDs
Supercharge_your_research_talk_1st_March_2023
A talk on my journey from regular biologist to data person
the_food_book_sandbox
This is a recipe book used to practice with Git, GitBook and GitHub
wrangling-pangenomes
Data Wrangling and Processing for pangenomics