Per Unneberg's repositories
pgip-exercises
Population Genomics in Practice - tutorials and exercises
cookiecutter-nbis-project
cookiecutter for NBIS projects
nbis-project-admin
NBIS project administration utilities
datasources-smk
Snakemake workflow to setup data sources
bokeh
Interactive Data Visualization in the browser, from Python
conda-recipes
Conda recipes for percyfal channel
d4-format
The D4 Quantitative Data Format
d4utils
Python utilities to work with d4 coverage files
docker-centos7-slurm
Slurm Docker Container on CentOS 7
GARG
Genealogies and Ancestral Recombination Graphs
nbis-course-quarto
NBIS course quarto template
percyfal.github.io
percyfal github io pages
pgip-jlite
JupyterLite test for pgip
pgtk
Population genomics toolkit
quarto-test
Test quarto actions
relate
Software for estimating genome-wide genealogies for thousands of samples
rust-bio-tools
A set of command line utilities based on Rust-Bio.
sgkit
Statistical genetics toolkit
simseqgen
Simulate sequences from genealogies and corresponding read sequences
snakemake-v7-github-action
A Github action for running a Snakemake workflow
stdpopsim
A library of standard population genetic models
Training-Tech-shorts
Short lessons, training various technologies useful to our work.
tsinfer
Infer a tree sequence from genetic variation data.