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pd321

pd321

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Company:Monash University

Location:Melbourne

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pd321's starred repositories

drl-zh

Deep Reinforcement Learning: Zero to Hero!

Language:Jupyter NotebookLicense:MITStargazers:1938Issues:0Issues:0

full_stack_ChromHMM_annotations

Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes

Language:PythonStargazers:26Issues:0Issues:0

RetroGamingWorkshop

Retro Gaming Workshop (first offered Winter 2018)

Language:JavaScriptLicense:NOASSERTIONStargazers:17Issues:0Issues:0

diHMM-cpp

Improved implementation of diHMM in C++

Language:MakefileStargazers:3Issues:0Issues:0

scChromHMM

🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.

Language:RustLicense:BSD-3-ClauseStargazers:24Issues:0Issues:0

nextflow

A DSL for data-driven computational pipelines

Language:GroovyLicense:Apache-2.0Stargazers:2582Issues:0Issues:0

Rectangle

Move and resize windows on macOS with keyboard shortcuts and snap areas

Language:SwiftLicense:NOASSERTIONStargazers:24931Issues:0Issues:0

RevigoCore

REVIGO (REduce + VIsualize Gene Ontology) Core library

Language:C#License:MITStargazers:6Issues:0Issues:0

scidataflow

Command line scientific data management tool

Language:RustLicense:MITStargazers:186Issues:0Issues:0

FriendsDontLetFriends

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Language:RLicense:MITStargazers:6119Issues:0Issues:0

inshellisense

IDE style command line auto complete

Language:TypeScriptLicense:MITStargazers:8180Issues:0Issues:0

system-design-101

Explain complex systems using visuals and simple terms. Help you prepare for system design interviews.

License:NOASSERTIONStargazers:59601Issues:0Issues:0

awesome-optimization

A curated list of mathematical optimization courses, lectures, books, notes, libraries, frameworks and software.

Stargazers:209Issues:0Issues:0

genome-seek

Clinical Whole Genome and Exome Sequencing Pipeline

Language:PythonLicense:MITStargazers:16Issues:0Issues:0

ngs-pipeline

Pipeline for Somatic Variant Calling with WES and WGS data

Language:PythonLicense:MITStargazers:17Issues:0Issues:0

quaich

snakemake pipeline for Hi-C post-processing

Language:PythonLicense:MITStargazers:21Issues:0Issues:0

ymp

Flexible omics pipeline

Language:PythonLicense:GPL-3.0Stargazers:18Issues:0Issues:0

Iliad

ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications

Language:PythonLicense:MITStargazers:28Issues:0Issues:0

zarp

The Zavolab Automated RNA-seq Pipeline

Language:PythonLicense:Apache-2.0Stargazers:29Issues:0Issues:0

genome_tracks

A Snakemake workflow for easy visualization of genome browser tracks of aligned BAM files (e.g., RNA-seq, ATAC-seq, scRNA-seq, ...) powered by the wrapper gtracks for the package pyGenomeTracks, and IGV-reports.

Language:PythonLicense:MITStargazers:10Issues:0Issues:0

atacseq_pipeline

Ultimate ATAC-seq Data Processing & Quantification Workflow. A Snakemake implementation of the BSF's ATAC-seq Data Processing Pipeline extended by downstream quantification and annotation steps using bash and Python.

Language:PythonLicense:MITStargazers:33Issues:0Issues:0

grenepipe

A flexible, scalable, and reproducible pipeline to automate variant calling from sequence reads.

Language:PythonLicense:GPL-3.0Stargazers:79Issues:0Issues:0

seq2science

Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.

Language:PythonLicense:MITStargazers:146Issues:0Issues:0

awesome-certificates

Curated list of 10,000+ hours and 100+ free certificates in IT, computer science and business.

License:CC0-1.0Stargazers:1625Issues:0Issues:0

TUI-apps

Terminal User Interface (TUI) apps

Language:PythonLicense:MITStargazers:546Issues:0Issues:0

textual

The lean application framework for Python. Build sophisticated user interfaces with a simple Python API. Run your apps in the terminal and a web browser.

Language:PythonLicense:MITStargazers:23838Issues:0Issues:0

hidden-markov-model

A from-scratch Hidden Markov Model for hidden state learning from observation sequences.

Language:PythonLicense:MITStargazers:39Issues:0Issues:0

pytudes

Python programs, usually short, of considerable difficulty, to perfect particular skills.

Language:Jupyter NotebookLicense:MITStargazers:22475Issues:0Issues:0

what-happens-when

An attempt to answer the age old interview question "What happens when you type google.com into your browser and press enter?"

Stargazers:39263Issues:0Issues:0

linkedin-skill-assessments-quizzes

Full reference of LinkedIn answers 2023 for skill assessments (aws-lambda, rest-api, javascript, react, git, html, jquery, mongodb, java, Go, python, machine-learning, power-point) linkedin excel test lösungen, linkedin machine learning test LinkedIn test questions and answers

License:AGPL-3.0Stargazers:28207Issues:0Issues:0