pd321

pd321's repositories

intron-retention-scripts

Scripts for intron retention analysis from RNA-Seq data

Language:Python1 1 1

analysis_template

A template for generic analysis

MIT010

atacseq

Snakemake based pipeline for atacseq dataanalysis

Language:Python02 9

build-your-own-x

Master programming by recreating your favorite technologies from scratch.

000

chipseq

A snakemake based workflow for ChIPSeq data analysis

Language:Python03 18

create-reference-indices

A snakemake workflow to create reference indices and other supplementary files for analysis

Language:Python02 1

cs-video-courses

List of Computer Science courses with video lectures.

000

dnaseq

Snakemake based workflow for analysis of dnaseq data for calling germline/somatic mutations

Language:PythonGPL-3.001 2

HemTools

HemTools: a collection of NGS pipelines and bioinformatic analyses

Language:Python000

m5c

Repository for m5c data analysis

Language:PythonMIT020

rnaseq

Snakemake based pipeline for analysis of rnaseq data

Language:PythonMIT02 3

Deep-learning-books

Books for machine learning, deep learning, math, NLP, CV, RL, etc

000

m6A

A workflow for m6A data analysis

Language:PythonMIT000

public-files

A set of public files needed downstream in other places

MIT010

PythonPlantsVsZombies

a simple PlantsVsZombies game

Language:Python010

scripts

Handy scripts to do miscellaneous tasks

Language:PythonMIT000

snakemake-wrappers

This is the development home of the Snakemake wrapper repository, see

Language:CAP CDS000

sra-explorer

Web application to explore the Sequence Read Archive.

Language:HTMLGPL-2.0000

TUI-ConsoleLauncher

Linux CLI Launcher for Android

Language:JavaNOASSERTION000