pbenner

autodiff

Autodiff is a numerical library for the Go programming language that supports automatic differentiation. It implements routines for linear algebra (vector/matrix operations), numerical optimization and statistics

gonetics

Go / Golang Bioinformatics Library

threadpool

Go Thread Pool

gp.regression

Gaussian Process Regression Library for GNU-R

modhmm

ModHMM Genome Segmentation Method

equitrain

Generic training script for Equiformer

matbench-discovery

An evaluation framework for machine learning models simulating high-throughput materials discovery.

double-descent

Simple examples of double descent (benign overfitting)

kmerLr

lisp-backprop

Old implementation of Backpropagation in Lisp

mace

MACE - Fast and accurate machine learning interatomic potentials with higher order equivariant message passing.

pinn

Physics Informed Neural Networks

pycoordinationnet

A neural network model for materials property prediction based on coordination environments

adaptive-sampling.gp

Adaptive Sampling with Gaussian Processes

alignn

Atomistic Line Graph Neural Network

classifierPerformance

Program to compute performance measures from predictions of a classifier

gocrypt

gonetics-tools

iss

kmerLr-binary

kmerLr-binary archive

modhmm-binary

ModHMM Binary Repository

modhmm-segmentations

ModHMM Segmentations Repository

ngstat

pbenner

pbenner.github.io

pwgen

Simple password generator

pyleapfrog

Leapfrog regularization for estimating sparse models in PyTorch

rustynetics

Bioinformatics Library in Rust

smartBinning

xenocode

Generate alternative genetic codes