Christopher Dunn (pb-cdunn)

pb-cdunn

Geek Repo

Company:Pacific Biosciences

Location:Menlo Park, CA

Github PK Tool:Github PK Tool

Christopher Dunn's starred repositories

Odin

Odin Programming Language

Language:OdinLicense:BSD-3-ClauseStargazers:6638Issues:83Issues:1932

go-systemd

Go bindings to systemd socket activation, journal, D-Bus, and unit files

Language:GoLicense:Apache-2.0Stargazers:2427Issues:52Issues:133

CTPL

Modern and efficient C++ Thread Pool Library

Language:C++License:Apache-2.0Stargazers:1788Issues:57Issues:22

tlsf

Two-Level Segregated Fit memory allocator implementation.

ncbi-genome-download

Scripts to download genomes from the NCBI FTP servers

Language:PythonLicense:Apache-2.0Stargazers:939Issues:35Issues:144

jql

Easy JSON Query Processor with a Lispy syntax in Go

Language:GoLicense:MITStargazers:896Issues:12Issues:3

cone

Cone Programming Language

gotest.tools

A collection of packages to augment the go testing package and support common patterns.

Language:GoLicense:NOASSERTIONStargazers:512Issues:11Issues:78

NimData

DataFrame API written in Nim, enabling fast out-of-core data processing

Language:NimLicense:MITStargazers:338Issues:18Issues:41

npeg

PEGs for Nim, another take

Language:NimLicense:MITStargazers:330Issues:18Issues:51

docopt.nim

Command line arguments parser that will make you smile (port of docopt to Nim)

Language:NimLicense:MITStargazers:212Issues:11Issues:31

nimdays

Nim days book

paranim

A Nim game library

Language:NimLicense:UnlicenseStargazers:115Issues:10Issues:1

coitrees

A very fast interval tree data structure

Language:RustLicense:MITStargazers:110Issues:8Issues:9

nim-taskpools

Lightweight, energy-efficient, easily auditable threadpool

Language:NimLicense:NOASSERTIONStargazers:101Issues:18Issues:15

nimline

Wrapper-less C/C++ interop for Nim

Language:NimLicense:MITStargazers:95Issues:8Issues:4

HiFiAdapterFilt

Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).

Language:ShellLicense:GPL-3.0Stargazers:80Issues:3Issues:13

GNNome-assembly

Learning to untangle genome assembly with graph neural networks.

Language:PythonLicense:MITStargazers:69Issues:3Issues:5

jsmn.nim

Jsmn - a world fastest JSON parser - in pure Nim

Language:NimLicense:MITStargazers:59Issues:4Issues:5

nimacros

Documentation for Nim Macros

PyParanoid

Rapid and scalable homolog identification for bacterial genomes

Language:Jupyter NotebookLicense:MITStargazers:32Issues:7Issues:11

nimp

A package manager that delegates to package authors

Language:NimLicense:ISCStargazers:19Issues:4Issues:0

minline

A line editing library in pure Nim.

Language:NimLicense:MITStargazers:18Issues:4Issues:12

BitVector

BitVector Implementation in Nim

Language:NimLicense:MITStargazers:17Issues:1Issues:6

AAV

Scripts for analyzing PacBio AAV sequences

Language:PythonLicense:MITStargazers:15Issues:3Issues:9

compute-graph-optim

Experiments in compute graph optimisations and ML and HPC compilers frontend

bamPals

an assortment of methods for bam|sam|cram files

Language:CLicense:MITStargazers:5Issues:2Issues:0