Open Microscopy Environment (ome)

Open Microscopy Environment

ome

Geek Repo

Software and data format standards for management of microscopy image data. Joint project between international private and public research

Home Page:https://www.openmicroscopy.org/

Twitter:@openmicroscopy

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Open Microscopy Environment's repositories

ansible-role-mysql-backup

Setup a cron job for regular full Mysql/Mariadb database dumps.

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ome-files-py

Python bindings for OME Files

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bio-formats-jace

Bio-Formats JACE C++ bindings

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docker-example-omero-microservices

Example of running OMERO.server microservices

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ecdp2019-publication

Supplementary information associated with Besson et al. (2019) ECDP 2019

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training-notebooks

A set of Python Notebooks to demonstrate how to access the images and metadata from OMERO

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ansible-role-celery-docker

Celery distributed processing with Docker

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ansible-role-docker-slack-notifier

Sends notifications to Slack when a Docker container is created, started, stop or destroyed

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ansible-role-munin

Ansible Role - Munin

design

OME Design proposals

docker-example-omero-ldap

docker-compose example for authenticating OMERO against LDAP

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kubernetes-apps

Services running on the OME Kubernetes

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pom-omero-client

Parent POM for OMERO clients (deprecated)

ansible-role-devspace

Provision OME developer devspace

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ansible-role-nginx-ssl-selfsigned

Generate self-signed SSL certificates for Nginx, for internal testing.

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ansible-role-omego

omego, a utility for downloading and installing OME applications

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ansible-role-omero-web-runtime

DEPRECATED: please see https://github.com/openmicroscopy/ansible-role-omero-python-deps

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ansible-role-python-virtualenv-upstream

Ansible role to setup a Python virtualenv using the upstream package

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docker-example-omero-grid

Multi-container OMERO

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infrastructure-extract-ansible-role

Galaxy infrastructure for a decoupled OME ansible role

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ome-files-jupyter-docker

Container for OME Files and Jupyter

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ome-files-performance

A repository for benchmark testing of OME Files

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ome-help

OME Project User Guides

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ome-release

Scripts for OME releases (deprecated)

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rseconuk2019-idr

RSEConUK 2019: How to build and run an international open-data image repository

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