npechl / empdata

The 150bp sequence-length subset of the EMP (Earth Microbiome Project) dataset

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empdata

Installation

# install.packages("devtools")
devtools::install_github("nikopech/empdata")

License

All data sets were collected from the FTP site of the Earth Microbiome Project.

Sample processing, sequencing, and core amplicon data analysis were performed by the Earth Microbiome Project (www.earthmicrobiome.org), and all amplicon sequence data and metadata have been made public through the EMP data portal (qiita.microbio.me/emp).

Please cite the following publication if you use any of them:

Thompson, L., Sanders, J., McDonald, D. et al. A communal catalogue reveals Earth’s multiscale microbial diversity. Nature 551, 457–463 (2017). https://doi.org/10.1038/nature24621

Please see the LICENSE file for details

About

The 150bp sequence-length subset of the EMP (Earth Microbiome Project) dataset

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Language:R 100.0%