Nikos Pechlivanis (npechl)

npechl

Geek Repo

Company:Institute of Applied Biosciences, Centre for Research & Technology, Hellas

Location:Thessaloniki, Greece

Home Page:https://npechl.github.io/

Twitter:@npechl

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Nikos Pechlivanis's repositories

TidyTuesday

A repository containing contributions to the TidyTuesday project

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InterTADs

Integrating multi-omics data coming from the same physical source (e.g. patient) by taking into account the chromatin configuration of the genome, i.e. the topologically associ-ating domains (TADs)

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lineagespot

Ιdentify and assign different SARS-CoV-2 lineages based on a single VCF file

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saveImageHigh

Saving an R graph as an image or a pdf with high resolution.

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acoRn

R package designed for exclusion-based parentage assignment

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ampliseq

Amplicon sequencing analysis workflow using DADA2 and QIIME2

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babynames

An R package containing US baby names from the SSA

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biohackathon-projects-2021

For BioHackathon Europe 2021.

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empclima

Microbial co-occurrence network reveals climate and geographic patterns for soil diversity on the planet

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empdata

The 150bp sequence-length subset of the EMP (Earth Microbiome Project) dataset

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ggplot2

An implementation of the Grammar of Graphics in R

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ggrepel

:round_pushpin: Repel overlapping text labels away from each other.

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immunovisual

A collection of charts made with the R programming language, focusing on immunogenetics analyses. Different charts types are being organized into multiple sections, each accompanied by its reproducible code. The gallery spotlights the utilization of prominent R packages such as tidyverse, data.table, and ggplot2.

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nikopech.github.io

:triangular_ruler: Jekyll theme for building a personal site, blog, project documentation, or portfolio.

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nycflights13

An R data package containing all out-bound flights from NYC in 2013 + useful metdata

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odyssey

Exploring Molecular Biodiversity in Greece: An Interactive R Shiny App Approach

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SnakeCube

Containerized Pipelines

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tidytuesday-1

Official repo for the #tidytuesday project

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tripr

T-cell Receptor/Immunoglobulin Profiler {tripr}

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