nilesh-tawari

Nilesh Tawari's repositories

Manuscript describing ChronQC is now available online in Bioinformatics

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Shiny tips & tricks for improving your apps and solving common problems

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Simple bacterial assembly and annotation pipeline

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Bioinformatics one liners from Ming Tang

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Nextflow based blast pipeline

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This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file.

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Generates Word Documents From Templates

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live example for ChronQC

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RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control

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Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

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Learning about Shiny Modules

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Distribution of exe files for smartpv

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Assembly and intrahost / low-frequency variant calling for viral samples

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