Nicholas Brazeau 's repositories
polySimIBD
Structured Wright Fisher Model for Malaria Population Genetic Simulations
nickbrazeau.github.io
My personal website: www.nicholasbrazeau.com
goodegg
Package developing framework and helper
bactopia
A flexible pipeline for complete analysis of bacterial genomes
starter-hugo-research-group
👥 轻松创建研究组或组织网站 Easily create a stunning Research Group, Team, or Business Website with no-code
genescaperlite
Stripped down version of Bob's Genescaper for AMMS2022
genescaper
Allele frequency mapping and outlier detection
NFBteach
Collection of previous teaching materials
jiffy_salmonella
playground salmonella jiffy outbreak
acconeer-python-exploration
Acconeer Python Exploration Tool
VivID_Epi
P. vivax in the DRC 2013-2014, Epi Codebank
chim_QI_magic_eightball
Simple Shiny App for Project Overdue DM QI metrics
template
A template for data analysis projects structured as R packages (or not)
icer
Infection composition estimation in R
bobfunctions2
A bunch of useful functions that make everyday coding easier.
Sepi_Res_CaseStudy
Codebank for the EMPH Manuscript (https://doi.org/10.1093/emph/eoaa031)
mip_bigbarcode_ehh
Extended Haplotype Heterozygosity work for "Big Barcode" Manuscript
short-course
Model-based Inference in Ecology and Epidemiology
mlrwrapSL
A simple wrapper of the SL algorithm using MLR toolbase
vcfdo
Some tools for processing and annotating VCF files, with focus on Plasmodium spp