Nicholas Brazeau 's repositories
bobfunctions2
A bunch of useful functions that make everyday coding easier.
nickbrazeau.github.io
My personal website: www.nicholasbrazeau.com
polySimIBD
Structured Wright Fisher Model for Malaria Population Genetic Simulations
Sepi_Res_CaseStudy
Codebank for the EMPH Manuscript (https://doi.org/10.1093/emph/eoaa031)
acconeer-python-exploration
Acconeer Python Exploration Tool
bactopia
A flexible pipeline for complete analysis of bacterial genomes
chim_QI_magic_eightball
Simple Shiny App for Project Overdue DM QI metrics
genescaper
Allele frequency mapping and outlier detection
genescaperlite
Stripped down version of Bob's Genescaper for AMMS2022
goodegg
Package developing framework and helper
icer
Infection composition estimation in R
jiffy_salmonella
playground salmonella jiffy outbreak
mip_bigbarcode_ehh
Extended Haplotype Heterozygosity work for "Big Barcode" Manuscript
mlrwrapSL
A simple wrapper of the SL algorithm using MLR toolbase
NFBteach
Collection of previous teaching materials
short-course
Model-based Inference in Ecology and Epidemiology
starter-hugo-research-group
👥 轻松创建研究组或组织网站 Easily create a stunning Research Group, Team, or Business Website with no-code
template
A template for data analysis projects structured as R packages (or not)
vcfdo
Some tools for processing and annotating VCF files, with focus on Plasmodium spp
VivID_Epi
P. vivax in the DRC 2013-2014, Epi Codebank