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nghiavtr
/
FuSeq_WES
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nghiavtr/FuSeq_WES Issues
Issue with the output and help required to interpret it
Updated
5 months ago
Comments count
3
error when trying to load ensmbl_paralogs_grch38.RData
Updated
a year ago
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1
install using biconda
Updated
a year ago
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1
how to extract the supported bam files? and can it generate the VCF files of the supported fusion?
Updated
a year ago
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2
Paralog database for hg38
Updated
2 years ago
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1
Is there a way I can exactly get genomic coordinate of the fusion breakpoint(left and right), the output(FuSeq_WES_SR_fge.txt or FuSeq_WES_SR_fge_fdb) contains a transcript range rather than the exact breakpoint of the fusion genes. Alternatively, how can I get exon number(or say ranks) or even intron number in output itself?
Updated
8 months ago
Comments count
4
How to interpreat the output data
Updated
2 years ago
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1
TypeError: _open() got an unexpected keyword argument 'threads'
Updated
2 years ago
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2
Documentation of Outputs and BEDPE
Updated
2 years ago
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2
Application to WGS
Updated
2 years ago
Comments count
1