nextco / dna-sequence-comparison

DNA Sequence Comparison on Bioinformatics

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DNA Sequence Comparison on Bioinformatics

C++ Implementations of the algorithms: Hamming Distance, Longest Common Subsequence, Global Alignment & Local Alignment.

Data

input/lcs.data

Structure

	/lcs-dp.cpp - Longest Common Subsequence (DP)
	/ga.cpp - Global Alignment
	/la.cpp - Local Alignment
	basic/hamming-distance.cpp - Hamming Distance
	basic/lcs-recursivo.cpp - Longest Common Subsequence (Recursive)

Compilation (x64 Native Tools Command Prompt for VS 2017 or g++)

cl srs.cpp
g++ lcs-dp.cpp -O3 -o srs

Execution

./lcs-dp.exe < input\lcs.data

Results




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DNA Sequence Comparison on Bioinformatics


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Language:C++ 98.1%Language:Python 1.9%