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John (neuropil)

neuropil

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Company:University of Colorado Anschutz Medical Campus

Location:Aurora, CO

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NERD-CO

John's starred repositories

statannotations

add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

Language:PythonLicense:NOASSERTIONStargazers:623Issues:0Issues:0

pyCompare

Python module for generating Bland-Altman plots

Language:Jupyter NotebookLicense:MITStargazers:34Issues:0Issues:0

ZETA

Zenith of Event-based Time-locked Anomalies

Language:MATLABLicense:GPL-3.0Stargazers:12Issues:0Issues:0

dPCA

An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)

Language:Jupyter NotebookLicense:MITStargazers:271Issues:0Issues:0

diffusion-models-class

Materials for the Hugging Face Diffusion Models Course

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:3407Issues:0Issues:0

stablediffusion

High-Resolution Image Synthesis with Latent Diffusion Models

Language:PythonLicense:MITStargazers:37711Issues:0Issues:0

d2

D2 is a modern diagram scripting language that turns text to diagrams.

Language:GoLicense:MPL-2.0Stargazers:16230Issues:0Issues:0

spikeinterface

A Python-based module for creating flexible and robust spike sorting pipelines.

Language:PythonLicense:MITStargazers:478Issues:0Issues:0

VoytekLab

The who, what, and where of Voytek Lab code.

License:MITStargazers:36Issues:0Issues:0

BandRatios

BandRatios project repository: Electrophysiological Frequency Band Ratio Measures Conflate Periodic and Aperiodic Neural Activity.

Language:Jupyter NotebookLicense:MITStargazers:11Issues:0Issues:0

gazer

Functions for reading and pre-processing eye tracking data.

Language:RStargazers:44Issues:0Issues:0

awesome-quarto

A curated list of Quarto talks, tools, examples & articles! Contributions welcome!

License:CC0-1.0Stargazers:1639Issues:0Issues:0

MClust-Spike-Sorting-Toolbox

MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is particularly good for tetrodes.

Language:MATLABLicense:GPL-3.0Stargazers:14Issues:0Issues:0

ggshadow

A collection of geoms for R's 'ggplot2' library. geom_shadowpath(), geom_shadowline(), geom_shadowstep() and geom_shadowpoint() functions draw a shadow below lines to make busy plots more aesthetically pleasing. geom_glowpath(), geom_glowline(), geom_glowstep() and geom_glowpoint() add a neon glow around lines to get a steampunk style.

Language:RLicense:GPL-2.0Stargazers:61Issues:0Issues:0

SPRiNT

Code for simulating neural time series, spectrogram parameterization (using SPRiNT), and generating figures from the SPRiNT preprint

Language:MATLABLicense:Apache-2.0Stargazers:37Issues:0Issues:0

aRt

R package to create generative art.

Language:RLicense:NOASSERTIONStargazers:129Issues:0Issues:0

AnalyzingNeuralTimeSeries

Code for ANTS book (Cohen, 2012, MIT Press)

Language:MATLABStargazers:170Issues:0Issues:0

aquarel

Styling matplotlib made easy

Language:PythonLicense:MITStargazers:605Issues:0Issues:0

phase-amplitude-coupling

Matlab routines for computing the Modulation Index and Comodulogram, as described in Tort et al., J Neurophysiol 2010

Language:MatlabStargazers:34Issues:0Issues:0

beapp

The Batch Electroencephalography Automated Processing Platform (BEAPP)

Language:MATLABLicense:NOASSERTIONStargazers:35Issues:0Issues:0

long_stable_diffusion

Long-form text-to-images generation, using a pipeline of deep generative models (GPT-3 and Stable Diffusion)

Language:PythonStargazers:680Issues:0Issues:0

whisper

Robust Speech Recognition via Large-Scale Weak Supervision

Language:PythonLicense:MITStargazers:64866Issues:0Issues:0

path-tracking

Analysis code for our path tracking experiment

Language:MATLABStargazers:1Issues:0Issues:0

pac_investigation

Investigating the link between spiking activity based beta bursts and lfp based beta activity using PAC

Language:PythonStargazers:2Issues:0Issues:0

LeGUI

Fast, easy-to-use intracranial electrode localization software built entirely in MATLAB

Language:MATLABLicense:GPL-3.0Stargazers:19Issues:0Issues:0

metrica

Prediction Performance Metrics

Language:RLicense:NOASSERTIONStargazers:71Issues:0Issues:0

jupyter-scatter

Interactive 2D scatter plot widget for Jupyter Lab and Notebook. Scales to millions of points!

Language:PythonLicense:Apache-2.0Stargazers:320Issues:0Issues:0

LovelyPlots

Matplotlib style sheets to nicely format figures for scientific papers, thesis and presentations while keeping them fully editable in Adobe Illustrator.

Language:PythonLicense:MITStargazers:828Issues:0Issues:0

Tensor-Puzzles

Solve puzzles. Improve your pytorch.

Language:Jupyter NotebookLicense:MITStargazers:2939Issues:0Issues:0

EmotiBit_Docs

Documentation and tutorials for the EmotiBit

License:MITStargazers:68Issues:0Issues:0